Plot Evoregions Classification

Usage

plot_evoregions(evoregions, coords, shapefile)

Arguments

evoregions: A list generated by calc_evoregions
coords: A rectangular object (it can be a matrix, data.frame or tibble) containing two columns, one with longitude and another with latitude coordinates in this order.
shapefile: An sf object containing the geographic boundaries to be overlaid on the raster map (e.g., continents, biogeographic regions, or study area limits).

Value

A ggplot2 object is returned.

Author

Maria Gabriela Junqueira and Gabriel Nakamura

Examples

if (FALSE) { # \dontrun{

# Compute evoregions

akodon_regions <-  Herodotools::calc_evoregions(comm = akodon_pa_tree,
                                         phy = akodon_newick)

#' #Load data

site_xy <- akodon_sites |>
    dplyr::select(LONG, LAT)

coastline <- rnaturalearth::ne_coastline(returnclass = "sf")

coastline_crop <- sf::st_crop(coastline,
                          xmin = map_limits$x[1],
                          xmax = map_limits$x[2],
                          ymin = map_limits$y[1],
                          ymax = map_limits$y[2])

plot_evoregions(evoregions = akodon_regions,
                 coords = site_xy,
                 shapefile = coastline_crop)

} # }