Calculate individual species coexistence in regional scale
IndivSpecies_regional_coex.Rd
Calculate individual species coexistence in regional scale
Usage
IndivSpecies_regional_coex(
df.TS.TE,
time.slice,
round.digits = 1,
species = "species",
TS = "TS",
TE = "TE"
)
Arguments
- df.TS.TE
a data frame object containing at least three columns. Species names, origination time and extinction time for each species.
- time.slice
scalar indicating the time interval between consecutive time slices
- round.digits
scalar indicating the number of digits for time of origination and time for extinction
- species
character indicating the name of the column of the data frame containing the species name information
- TS
character indicating the name of the columns of the data frame containing the information on origination time
- TE
character indicating the name of the column of the data frame containing the information on extinction time
Value
A list with two elements:
- df_IndivSpp_coexist
A data frame with species name, the number of coexistence for each sepecies in each time slice
- mean_species_coexistence
A data frame with three column. The species name, the mean number of coexistence for each species and the variance considering all time slices